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147 Cards in this Set
- Front
- Back
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What are the Human uses of fungi?
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Food, Alcohol, Citric Acid, Penicillin, Industrial processing, Agriculture, Hallucinogens.
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What are the defining characteristics of fungi?
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Hyphae, spores, Thallus, sporocarp, Cell Walls
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What distinguishes fungi from other eukaryotes?
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Get nutrients by Absorption, and reproduce by Spores.
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What groups of organisms have been included in fungi, broadly defined?
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Chromista including (Oomycota), and Protists
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How has fungal evolutionary relationships been inferred?
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Morphology, Biochemistry, Spore reproduction, Absorptive, Heterotrophic nutrition.
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How many fungus species are known? What is the distribution?
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97330 in Dictionary… 65k Asco… 31k Basidio… 1k Zygo… 700 Chytrid… 100 Blastocladio and Glomero
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How many species are estimated to exist?
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1.5 Million… 712k minimum (Mueller 2006)
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Is there a fungus species named for homer simpson? Dracula?
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Yes, Valsonectria simpsonii… Vladracula annuliformis…
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How are oomycota different? (Anamorph, teleomorph, holomorph. Fossile Record.)
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One tinsel and one whip flagella… Mostly diploid life cycle… Cellulose B-glucan walls… Mycolaminarins vs glycogen… Tubular cristae… Golgi with multiple Cisternae… Lysine synthesis and DAP pathway like plants.
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How old are fossil fungi?
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460Mya is oldest fossil… (Ordovician 455Mya glomeromycetes),,, (Silurian 420Mya ascomycetes)
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What are key dates of fungal divergence? (Lineages)
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630 Mya for zygomycetes and chytrids… 600 Mya for Glomero… 500Mya Asco / Basidio… 320Mya for Everything else
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What do fungi need for growth?
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Everything plants need + Carbon source
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What is the composition of fungal cell walls?
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Chitin (1-4 n-acetyal glucosamine) and B-glucans (Beta 1-3 or 1-4 glucose or cellulose polymers)
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What are exoenzymes?
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Secreted enzymes that break down substrate so fungi can absorb it?
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What are the enzymes of the cellulase complex? What do they do?
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cellobiohydrolase… glucanohydrolase + endoglucanase… cellobiase
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What enzymes degrade lignin, and what do they do? (mechanism)
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(White rot fungi)… Phenol-oxidases… Oxidative attack makes free radicals… (Manganese peroxidase, Glyoxal oxidase, Laccase)
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Examples of root decay pathogens? What is the difference between, white, brown, and soft rot fungi?
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Armillaria, Heterobasidion, Phellinus….. white (cellulases and lignases)… brown (cellulases only)
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What does the spitzenkorper do?
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Associated with growing hyphal tips.
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What does the cytoskeleton do?
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Microvesicles transporting chitin synthases to growing cell wall.
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What is a dolipore septum?
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The septal pore has a cap or parenthosomes. (complex and unique to basidiomycota)
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What is a parenthosome?
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A organelle that is associated with basidiomycota dolipore septa. (Septal pore cap)
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How are basidiomycetes different from other groups?
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Septate Mycelium, clamp connections, complex dolipore septa, dikaryotic haploid mycelium, sexual spores on basidium, complex sporocarps.
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What are the 3 classes of basidiomycota?
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Agaricomycotina (Homobasidiomycetes)… Ustilaginomycotina (Ustilaginomycetes)… Pucciniomycotina (Urediniomycetes)
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How are hymenomycetes and Hymenomycetes different?
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they arent.. At least I don’t think. =/
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How are hymenomycetes are gasteromycetes different?
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Hymenomycetes have a holobasidia and hymenium that remains intact during sporulation and is exposed (gills, pores, discharge ballistospores etc.) … Gasteromycetes don’t have showing hymenium at basidiospore release (closed basidiospores with passive discharge)
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What is Holobasidium, and it's taxonomic significance? What is the other form called?
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Basidium not divided by septa. (i.e. all sterigmata merge into same cell body) … Opposed to Phragmos-basidium
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What is phragmosbasidium and it's taxonomic significance? What is the other form called?
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Basidium divided by one or more septa. (i.e. spores or sterigmata each lead to a different cell)… opposed to Holobasidium.
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Is the septal pore structure of basidiomycota phylogenetically informative?
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Yes… If you see spores not separated by septa they are holobasidium in the Agaricomycetes subphyla … However having septa doesn’t disqualify something from being an Agaricomycete.
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What is a hymenium?
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Tissue layer that contains the reproductive cells (basidia), and supporting sterile cells.
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What is a hymenophore?
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A basidiocarp with a Hymenium
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What is a monokaryon? (also homokaryon)
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All nuclei are identical, there may be multiple nuclei per hyphal compartment tho.
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What is a dikaryon (heterokaryon)?
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(Asco / Basidio) 2 Different compatible haploid nuclear types pair and divine synchronously.
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What do mating type genes (loci) control?
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Compatability at A only results in Barrage…. If B is compatable then reaction is Flat.
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Distinguish between unifactorial (dipolar) and bifactorial (tetrapolar) mating.
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Unifactorial has only 1 mating locus and requires 2 unique alleles for mating… Bifactorial has 2 unlinked mating loci on different chromosomes and requires 4 different alleles for mating compatability. (75% are bifactorial)
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Distinguish homothallic, heterothallic, and secondary heterothallic.
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25% Homo can self fertalize, 75% hetero is obligate outcrossing, 2nd-ary Basidiospores are binucleate (one nucleus of each mating type) and germinating spores are already dikaryotic.
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What are mating type loci, what do they control?
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Mating comptability. (A = nuclear pairing, Initiation of clamp, Separation of Clamp) (B = Septal breakdown, Nuclear Migration)
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What is a clamp connection? What does it indicate? What problem it solve?
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Direction of growth, and 2 different nuclei per cell. Distal cell go backwards to merge with proximal cell.
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What is somatic vs mating incompatibility?
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Mating incompatibility is in monokaryons… Somatic incompatability functions in dikaryophase.
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What problem does somatic incompatibility solve?
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Incompatible reactions result in cell death to prevent mixing of genetic material.
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What did Buller do for amusement?
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Wrote poems about science.
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What are the 5 Fungal Phyla?
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Zygo, Glomero, Chytridio, Basidio, Asco.
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What are the 3 types of meiosis?
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Intranuclear, centric, noncentric.
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Characteristics of Asco and Basidiomycota?
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Septate, and Complex Sporocarps.
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Characteristics of Glomeromycota?
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Aseptate, Lack meiosis?
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Characteristica and Subphyla of Zygomycota?
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Aseptate normally, Zygosporangium, (Dimargaritales, Entomophthorales, Mucorales, Zoopagales, Endogonales, Trichomycetes, Harpellales, Kickxellales)
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Characteristics and subphyla of Chytridiomycota?
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Aseptate hyphae, zoospore (chytridales, Monoblepharidales, Spizellomycetales, Neocallimastigales)
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Blastocladiomycota,,, characters and what 1 order?
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Blastocladiales
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Fungi, vs fungi… wtf?
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Fungi is a monophyletic Kingdom… fungi is a polyphyletic group including Chromista (Stramenopila) and Protists (Protoctists)
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Function of Cellobiohydrolase and Exoglucanase?
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Cleaves END of cellulose polymer.
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Function of glucanohydrolase and endoglucanase?
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Cleave internal bonds of cellulose
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Function of cellobiase?
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Hydrolyses cellobiose to glucose monomers.
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What cleaves cellobiose units from ENDS of cellulose polymer?
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Cellobiohydrolase… EXOglucanase
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What cuts internal bonds of amophous cellulose?
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Cellobiohydrolase and ENDOglucanase.
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What hydrolyses cellobiose to glucose monomers?
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Cellobiase
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What is Laminated Root rot? Examples? Location? Function?
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White rot, Phellinus weirii… Waldo Lake…Douglas fir laminated root rot west of cascades… Western redcedar butt rot in Idaho… Stays alive thousands of years in roots after forest fires.
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How is Basidiomycota (phylum) specifically characterised?
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Having Meiospores called basidiospores that are formed on specialized cells, basidia (the site of meiosis)
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What things (not groups) falls into the Agaricomycotina category?
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Muchrooms, Polypores, Jelly Fungi, Corals, Chanterelles, Crusts, Puffballs, Stinkhorns.
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What things (not groups) falls into the Ustilaginomycotina category?
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Smuts, Exobasidium, Malessezia
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What things (not groups) falls into the Pucciniomycotina category?
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Rusts, Septobasidium (insect parasites).
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What is a Crucibulum?
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Cup-Shamed, dull white peridioles, funiculus.
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What is a peridiole?
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A spherical spore that is ejected from cup shaped basidia.
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What makes the Sphaerobolus speicies unique?
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It's a cup shaped Cannon-ball fungus with one peridiole that is launched when the osmolarity of the endoperidium causes it to invert and project the peridiole out.
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What is unique about the Lycoperdon group?
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They passively discharge spores when water hits them on their continuous. peridium.
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What are the 3 types of Mycelium?
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Primary (monokaryon)… Secondary (dikaryon) with clamp connections … Tertiary, organized specialized tussues that make up the basidiocarp.
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What is Monokaryon fusion Anastomosis?
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Fusion of branches of the same or different hyphae?
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Most basidiomycetes are what thallic? How is it distributed?
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Most heterothallic… 25% of heterothallic are unifactorial… 75% are Bifactorial. With A and B loci.
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What is Homothallic?
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Dikaryon formation occurs in single, self-compatible thallus. (25% of basidiomycetes)
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What is Heterothallic?
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Requires 2 different unique compatible thalli… 75% of all basidiomycetes.
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What is Secondary Homothallic?
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Basidiospores are Bi-Nucleate… One nucleus of each mating type… Germinating spores are already dikaryotic.
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What is the MAT locus and genes?
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MAT locus consists of a few to several tightly linked genes (2+)
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What describes unifactorial (bipolar) MAT genes?
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One locus or factor (A).. Requires 2 unlike alleles for mating compatability (25% of heterothallic species)
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What describes Bifactorial (tetrapolar) MAT genes?
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Two UNLINKED loci on different chromosomes (A and B)… Requires 4 alleles for mating (75% of heterothallic species)
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What is unique about Hymenomycetes mating?
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They can have tons of different mating alleles per loci.. (A is locus,,, with alleles 1, 2, 3, 4 etc)
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Giving mating examples (Loci+allele) for Unifactorial Bipolar monokaryon.
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A1 x A2 (karyogamy) ---> A1A2 (meiosis) ---> A1 + A2 (spores)
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Giving mating examples (Loci+allele) for Bifactorial Tetrapolar monokaryon.
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A1B1 x A2B2 (karyogamy) ---> A1B1A2B2 (meiosis & reassortment) ---> A1B1, A2B2, A1B2, A2B1 possibilities.
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A1B1 x A1B2 (same A allele) causes what observation?
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NO clamps… Flat
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A1B1 x A2B1 (same B allele) causes what observation?
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YES clamps,,, BUT no nuclei migration… Barrage
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What does the A locus control?
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Nuclear pairing… Clamp Initiation… Clamp Separation…
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What is A (alpha) and A (beta) … 32 and 9 in Schizophyllum commune
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Closely linked subloci with multiple alleles. A different at either alpha OR beta results in successful mating compatability.
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What does the B locus control?
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Septal Breakdown… Nuclear Migration… Pheromone and receptor recognition…
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What is B (alpha) and B (beta) … 9 and 9 in Schizophyllum commune
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Closely linked subloci with multiple alleles. A different at either alpha OR beta results in successful mating compatability.
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What is an example of secondary homothallic species? Why?
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Agaricus bisporus (supermarket mushroom)… Spore contains 2 haploid nuclei with compatible mating type alleles… (spore has A1 AND A2 already)… Spore then germinated directly into a dikaryon.
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basidiomycetes vs Basidiomycota?
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Basidiomycota is the phylum characterized by having meiospores called basidiospores that are formed on a basidium… basidiomycetes is a common name for the phylum but is not taxonomic.
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What groups or species fall into the Agaricomycotina category?
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Agaricales, Boletales, Russulales, Cantharellales (mushrooms) … Gomphales, Phallales (coral, club, stinkhorn) … Hymenochaetales, Polyporales (polypores) … Auriculariales, Dacrymycetales Tremellales (Jelli Fungi) … Geastrales (earth star)
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What groups or species fall into the Ustilaginomycotina category?
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Ustilaginomycetes (smuts and plant pathogents) … Exobasidiomycetes ---> Exobasidium (plant pathogens) … Malessezia (mammalian skin yeast)
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What groups or species fall into the Pucciniomycotina category?
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Pucciniomycetes, Pucciniales/ Uredinales (rusts and pathogens) … Septobasidiales (crusts and insect parasites) … Microbotryomycetes (Plant pathogens)
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Describe the septa of the subphyla of the Basidiomycota.
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Agarico have a dolipore septum… Ustilaginio have a smut or "simple" dolipore septum with no cap… Puccinio have a simple septum with no cap but occlusions to the pore.
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What subphyla of Basidiomycota have and do not have teliospores?
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Agaricomycotina does not have teliospores… Ustilaginiomycotina and Pucciniomycotina do.
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How is the Agaricomycotina broken down and how are their pores different?
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Both have dolipore septa… Hymenobasidiomycetidae have a perforated OR nonperforated cap while Tremellomycetidae have nonperforated OR no cap.
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What are Basidioles, Cystidia and Hyphidia?
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Basidioles resemble basidia but have not produced spores … Cystidia are larger and unique but not understood… Hyphidia have a modified terminal hyphae.
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What basidia groups do not have septa (homobasidiomycetes)?
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Agaricales, Boletales, Cantharellales, Phallales, Polyporales, Russulales, Thelephorales.
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What basidia groups have septa?
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Augiculariales, Ceratobasidiales, Dacrymecetales, Filobasidiales, Tremellales, Tulasnellales.
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What defines Aphyllophorales, and what 4 groups are part of it?
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Non-gilled hymenomycetes … Thelephoraceae, Clavariaceae, Hydnaceae, and Polyporaceae.
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Describe the family (Basidiomycota / Holobasidiomycetes / Hymenomycetes) ---> Dacrymycetales
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Tuning fork basidia (aseptate) with 2 long sterigmata. Basidiospores become septate (2-3 lobes)… Causes brownrot and most specieis are orange or yellow.
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Describe Auriculariales
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Looks like ear that grows on a log.
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Describe Agaricaceae
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Gills Pink then brown in age… Brown spores.. Distinct Annulus… Free gills… Saprotrophs
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Describe Amanitacea
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(Toadstool) red top with nubs… Free gills… Annulus.. Example Aminita muscaria.
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Describe Russulaceae
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Brown top… White Print… Stem breaks like chalk… Examples (Lactarius or Russula)
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Describe Coprinaceae
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Coprinus (Inky Caps)… Grow in clumps… Liquify quickly… Saprotrophs
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Describe Hygrophoraceae
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Bright colored (orange)… Waxy gills… White Print… Mycorrhizal and saprotrophic spp
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Describe Tricholomataceae
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Diverse group of white spored muchrooms… Includes Armillaria, Clitocybe, Lentinus, Mycena, Marasmius, Pleurotus, Tricholoma.
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Describe Boletaceae
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Hymenium is sponglike with tubes or pores… Sometimes Truffles… Examples of Suillus (slimy), Boletus (dry), and Leccinum.
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Describe Hymenochaetaceae
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No clamps… Brown to Redbrown… Grows on wood (conks)… Examples of Phellinus, Inonotus, Coltrichia, and Hymenochaete.
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Describe Ganodermataceae
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Conks growing on wood and shelped shaped… Perennial… With clamps… Ganoderma specieis.
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Describe Polyporaceae
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Poroid hymenium… Grows on wood… Includes Fomes, Fomitopsis, Laetiporus, Polyporus, Trametes, Gleophyllum.
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What are the 3 types of Hyphae?
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Generative hyphae, (Vegetative Hyphae), Skeletal hyphae, and Binding Hyphae.
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Describe Cantharellaceae
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Terrestrial / mycorrhizal… Annual… White Print,,, funnel shaped basidiocarp… Example Cantharellus Craterellus.
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Describe Gomphaceae
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Terrestrial / mycorrhizal… Annual… Ochre Print,,, funnel shaped and wrinkles warted basidiocarp… Example Gomphus
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Describe Clavariaceae
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Coral including Clavaria, Ramaria, Thyphula… Annual
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Describe Corticiaceae
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Conks growing on dead wood… Mostly resupinate or reflexed… Corticium, Peniophora, Stereum.
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Describe Hydnaceae
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large Basidiocarps with toothed hymenium. Big brown cap like Sarcondon… Also Hydnum, and Hydnellum.
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Describe Hericiaceae
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White… Looks like parsley… Grows on wood… Toothed hymenium… Amyloid spores… Example Hericium
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How common are mycorrhizal connections in plants?
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85% of terrestrial plants are mycorrhizal.
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What are Ectotrophic Ectomycorrhizae? Vs endo
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Hyphae surround the root cells. (no penetration)
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What are Endotrophic Endomycorrhizae? Vs Ecto
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Hyphae enter the cortical cells of the root and are enveloped by the plasmaelmma of the host.
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What plants have mycorrhizae?
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85% of all terrestrial plants.
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What do mycorrhizae do?
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Increase surface area of plant-soil interface… Increase nutrients… Protects roots from pathogenic fungi… Increase fitness in and between plants via mycorrhizal network.
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What is the main example of Arbuscular mycorrhizae that’s endotrophic.
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Glomalean (Glomeromycotan)… Huge green ball that has been around for 400+ Mya
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Ectomycorrhizal Hymenomycetes…
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Cantherellus, Ramaria, Boletus, Tricholoma, Rhizopogon, Amanita, Russula, Suillus, Laccaria, Pisolithus, Cortinarius.
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How common is Ectomycorrhizae (ECM) vs Arbuscular (AM, VAM) mycorrhizae?
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ECM is about 2000 spp while VAM is 300,000 species.
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What are the various Mycorrhizae types?
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Ericoid, Arbutoid, Monotropoid, Orchids,
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What are Ericoid mycorrhizae defined by?
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Low nutrient soil,,, hair roots 2-3 cells thin. Forms coiled structures
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What are Arbutoid mycorrhizae defined by?
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Can form mycorrhizal connections with many plants at same time.
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What are Monotropoid mycorrhizae defined by?
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Mycotrophic plants eat the ectomycorrhizal fungi by lysing part of the fungal cell and absorbing it.
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What are Homobasidiomycetes? Holobasidia?
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Same thing… 8 groups of nonseptate basidia.
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What are gasteromycetes? Traits?
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Spores mature inside basidiocarp. Not forcibly discharged. (not a formal taxa… traits evolved 4 unique times).
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What is a Statismospore?
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Spores on sterigmata that are formed symmetrically, and not actively discharged.
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What is Gleba?
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Fertile portion of Holobasidia that contains basidia and spores.
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Define Peridium.
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Outer covering of basidiocarp,,, sometimes multilayered.
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Define Peridiole.
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Small structures containing basidiospores and basidia (at bottom of cup) *think water*
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Traits of Scleroderma and Pisolithus (sclerodermatiniae)
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Sclero are small earth balls with dark center gleba. ECM.. Spores are spikey, (reticulate)… Pisolithus is dead mans hand.
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What are Melanogaster, and Rhizopogon?
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Tubers or false truffles. Hypogeous balls
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What Gasteromycetes are Agaircales? (stuffed puffballs)
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Puffballs and Crucibulum,
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What Gasteromycetes are Phallales?
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Stinkhorns, earth stars, and Cannon balls.
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Gasteromycetes in Russulales? (unimportant)
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Balls called Macowanites or Zelleromycetes are 2 examples.
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In Rusts and smuts… Where does the dikaryon appear.
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In the Teliospore
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What does host specificity refer to?
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If a fungus is restricted to a specific host or group of hosts… Or can just be lots of places.
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What does host range refer to?
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The different plant species a fungis is capable of establishing a parasitic relationship with.
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What is the structure "appressoria and haustoria"?
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App is adhesion.. Haust is nutrient uptake arm that sticks itself inside the plant cell.
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What do the terms "autoecious and heteroecious" refer to, in rusts?
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auto is life cycle on just 1 host… Hetero has 2 or more hosts.
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Phases of wheat rust life cycle?
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pycnia monokaryon > Aecia dikaryon > uredinia binucleate > Telia karyogamy makes diploid > basidia meiosis to haploid basidiospores.
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In rusts, what does Macro demi or micro cyclic refer to?
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Macro is all stages,,, Demi skips Uredinia (3) ,,, Micro skips Uredinia and aecia… (2-3)
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In rusts,,, what stages are on aecial (secondary) host?
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0 and 1… Pycnia and Aecia
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In rusts,,, what stages are on the telial (primary) host?
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2-4… Uredinia to Telial to Basidium.
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What is Tranzschel's Law
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Macrocyclic rust are ancestral… Microcyclic species are derived from Macro but lost stage 1 and 2.
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What are stephanocysts and Toxocysts.
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Nematode capturing devices and paralytic toxins.
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What are exobasidiomycetes and exobasidium? Example?
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Skin Malassezia, Cryptococcus neoformans.
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