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35 Cards in this Set

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Biochemistry

The science concerned with the chemistry of biological processes. The study of life at the molecular level.

Cells

Basic structural units of a living organism. are highly organized and constant source of energy is required to maintain the ordered state.

Membranes

Composed of protein and phospholipid, separate aqueous compartments.

Amino acids

Building blocks of proteins. 20 commonly occurring. Contain amino group and carboxyl group. R group (side chain) determines the chemical properties of each amino acid.

Sugars

Carbs. Most abundant organic molecules in nature. Basic unit is monosaccharide. Store energy in the form of starch. Provide energy.

Fatty Acids

Monocarboxylic acids. Contain even numbers of C atoms. Saturated is single bond. Unsaturated has double bonds. Components of several lipid molecules.

Metabolism

Total sum of a chemical reaction happening in a living organism. Anabolism and catabolism.

Anabolism

energy requiring biosynthetic pathways.

Catabolism

Degradation of fuel molecules and the production of energy for cellular function.

Nucleophilic Substitution

One atom of group is substituted for another.

Elimination reactions

Double bond is formed when atoms in a molecule are removed.

Addition reaction

Two molecules combine to form a single product. Hydration reactions.

Isomerization reactions

Involve intramolecular shift of atoms or groups.

Redox reactions

transfer of electrons from a donor to an electron acceptor.

Hydrolysis reactions

Cleavage of double bond by water.

Life uses (BLANK) to drive otherwise unfavourable reactions

Chemical Coupling

Life uses (BLANK) to speed up otherwise slow reactions

Enzymes

How do complex structures of cells maintain a high internal order. (1-4)

1. synthesis of bio-molecules 2. transport across membranes 3. cell movement 4. waste removal.

6 abundant elements found in living cells are

CHNOPS (CHuck NOrris Plays Savagely)

Stereochemistry

Geometric isomers. Configuration is restricted by a double bond. Have same bonds and atoms, just different configurations around a chiral center. Enantoimers, diastereomers. Differ in biological activity, because they fold differently (different molecular structures)

Enantiomers

mirror images

Diastereomers

Stereoisomers that are not mirror images.

Cohesion

Refers to water's attraction to other water molecules. responsible for surface tension

Adhesion

Refers to water's attraction to other substances. It is adhesive to any substance with which it can form hydrogen bonds. Adhesion to hydrophilic not hydrophobic.

Water physical chemistry

High specific heat capacity. High heat of vaporization.

Polar nature of water

Water is a polar molecule with a dipole moment. net charge on oxygen is -0.66, and on each hydrogen it is +0.33

Hydrogen Bonding

H-Bonds are weak non covalent interactions. water is both a hydrogen donor and acceptor. Water can form up to 4 h-bonds (1/hydrogen, 2/oxygen)

Electronegativity

A measure of the force of an atoms attraction for electrons it shares in a chemical bond with another atom.

Nonpolar

No electronegativity difference between two atoms.

polar Covalent bond

A small electronegative difference between atoms.

Ionic Bond

A large electronegativity difference between atoms

Mole

6.023 x 10^23

pH

-log(H+)

Henderson Hasselbach Equation

pH = pKa + log(A-/HA)

Buffers

A weak acid plus its conjugate base that cause a solution to resist changes in pH when an acid or base is added.