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10 Cards in this Set

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RNA Components

Phosphate


Phosphodiester Link


Bases - C, A, G, U


Ribose - has OH group


Synthesised 5’ to 3’

Transcription by Pol 2 generates pre-mRNA

Transcription occurs, also cap formation and poly (A) addition


PRIMARY TRANSCRIPT


(pre-mRNA)


Undergoes splicing to give mature mRNA

Pre-mRNA Processed by Capping and Splicing

5’ cap and 3’ polyA Tail of pre-mRNA are retained as it’s processed


Capping allows cell to assess whether both ends are present before RNA is exported from nucleus for translation

When is 5’cap added?

Added to emerging pre mRNA


site specific phosphorylation of Pol 2 at C terminal recruits capping proteins


Capping occurs when pre-mRNA is ~25 nucleotides long

What effects occur to the structure due to 5’ capping?

Loss of phosphorylation group


Formation of a rare 5’-5’ triphosphate linkage with GTP


Methylation of terminal guanine


Additional methylations

What does 5’ capping do?

Provides Stability

When is 3’ Poly-A Tail added?

As pre-mRNA is completed


Site specific phosphorylation of Pol 2 at C terminal recruits 3’ end processing proteins


E.g. poly-A polymerase

Where can you find 3’ Poly-A Tail?

Can be 100’s of nucleotides beyond the 3’ end of mature mRNA (outwith the coding region)

What effect does Poly-a Tail have on mRNA?

It may increase the stability of mRNA and enhance its translation

Splicing of pre-mRNA

Site specific phospho