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40 Cards in this Set

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What are some statements about DNA?

- synthesized in the 5' to 3' direction.


- contains the bases A, G, C , and T


- energy for DNA synthesis comes from cleavage of phosphoanhydride bonds in the deoxynucleotide or nucleotide building blocks.


What are some statements about RNA?

- synthesized in the 5' to 3' direction.


- energy for DNA synthesis comes from cleavage of phosphoanhydride bonds in the deoxynucleotide or nucleotide building blocks.


- contains the bases A, G, C and U.

An RNA strand has the sequence GAGC. Which sequence below represents its template DNA strand? GCTC, CUTU, GCUC, CTCG

GCTC

Why is uracil present in RNA but not DNA?

Because the deamination of cytosine produces uracil, which is then excised to avoid mutation.

Adenosine is a___________.

Nucleoside

Adenine Adenylic acid or AMP is a___________.

Base

Adenylic acid or AMP is a___________.

Nucleotide

According to Chargaff's rules for the base composition of DNA, %A = %T and %G = %C. True or False?

True

The complementary base paired double helix structure of DNA is ideal for replicating genetic information because each DNA strand can act as a template for the synthesis of its complementary strand with the hereditary information encoded in the sequence of bases on either strand. True or False?

True

DNA is the carrier of genetic information in all cells and in many viruses. True or False?

True

Methylase?

Modification enzyme that adds a methyl group to a nucleotide

Restriction Endonuclease?

Enzyme that cleaves DNA at sites that correspond to a particular sequence of nucleotides.

Exonuclease?

Enzyme that cleaves a nucleotide by removing a terminal residue

DNA polymerase?

Enzyme that participates in DNA replication

Dideoxynucleoside triphosphate?

Nucleotide that lacks both 2' and 3' -OH groups

Palindrome?

Nucleotide sequence with two-fold symmetry

What are some statements about restriction enzymes (restriction endonucleases or RE’s)?

- They are endonucleases.


- They are a part of a bacteria’s restriction-modification system – a system bacteria use to defend themselves against bacteriophages.


- They recognize and cut pallindromic DNA sequences.

What isCloning?

Production of multiple identical organisms

What is Ligation?

Covalent linking of two segments of DNA

What is Transformation?

Stable introduction of foreign DNA into a host cell

What is a Polymerase chain reaction?

Amplification of a DNA sequence via multiple cycles of synthesis

What is Site-directed mutagenesis?

Modification of a nucleotide sequence to alter an amino acid sequence

What feature must an expression vector have that an ordinary plasmid might lack?

Sequences to control transcription and translation

Why does the polymerase chain reaction require a heat-stable DNA polymerase?

High temperatures are necessary to cause strand separation after each cycle of synthesis.

In the Watson-Crick model of DNA, the two strands are parallel, meaning that they run in the same 5’ to 3’ direction. True or False?

False. The strands are antiparallel and run in opposite 5’ to 3’ directions

The unique DNA content of an organism is known as its genome. True or False?

True

What are some true statements about base Watson-Crick complementary pairing:

- Each base is hydrogen bonded to a base in the opposite strand to form a planar base pair.


- Each A pairs with T and each G pairs with C.


- Each DNA strand can act as a template for the synthesis of its complementary strand.

What is the typical structure of RNA as found in cells?

Single-stranded chains in compact, stem-and-loop structures

When found in duplex DNA, the sequence ATATAT is a palindromic DNA sequence. True or False.

True

What is the role of 2'-3'-dideoxynucleoside triphosphates in the chain terminator method of DNA sequencing?

To generate a series of truncated chains during DNA synthesis

What is a true statement about DNA gel electrophoresis?

DNA is added to one side and electrophoresed by applying a voltage difference between the two ends of the gel - DNA is a negative polymer and travels towards the anode.

What are some findings derived from the results of the sequencing of the human genome?

- Up to 60% of the genome is transcribed to RNA.


- Only 1.1% to 1.4% of the genome (~ 2% of the transcribed RNA) encodes protein.


- Two randomly selected human genomes differ, on average, by only 1 nucleotide per 1250; that is, any two people are likely to be > 99.9% genetically identical.

Nucleoside triphosphates are useful for energy transfer because the phosphoanhydride bonds are relatively ______.

high energy

By convention, the sequence of nucleotide residues in a nucleic acid is written ___________ starting with the ____ end.

left to right; 5'

Recombinant DNA technology can be used for

- constructing mutant proteins.


- the industrial production of useful proteins.


- producing transgenic organisms.


- correcting genetic defects.

In molecular cloning, transformed organisms must be identified. One common method for accomplishing this involves the inclusion of ________ in the plasmid.

an antibiotic resistance gene

A genomic library...

is a collection of cloned DNA fragments representing all of an organism’s DNA.

If a 28 base-pair segment of double-stranded DNA contains 7 adenine residues, how many guanine residues are there?

21

A double stranded DNA fragment contains 12% adenine residues. Calculate the percentage cytosine residues.

38%

In 1944 Avery, MacLeod, and McCarty did experiments with Diplococcus pneumoniae that proved that...

DNA can permanently transform a non-pathogenic strain into a pathogenic strain.